Protein ZmC3H40
ZmC3H40 is a protein in the C3H family.
Information
TF Name: ZmC3H40
Species: Maize
TF Family: C3H
Gene Name(Synonym): C3H40
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmC3H40

ZmC3H40 is a protein in the C3H family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00076PF00642
Zm00001eb316870_T007
Zm00001eb316870_T001
Zm00001eb316870_T002
Zm00001eb316870_T003
Zm00001eb316870_T004
Zm00001eb316870_T005
Zm00001eb316870_T006

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d020954DAPseq no logo sequence fimo position
Zm00001d020954DAPseq no logo sequence fimo position
Zm00001d020954ChIPseq no logo sequence fimo position
Zm00001d020954PChIPseq no logo sequence fimo position

Interactions where ZmC3H40 is the regulator  
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There are 8677 protein-dna interactions that fit this criteria. download excel sheet

Interactions where ZmC3H40 is the target  
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There are 127 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb316870_T007 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00642
PF00076
PF00642
Hover here to show all domains

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...

GRMZM2G177229_T01 from maize genome v3


Related TFome: pUT3136

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

GRMZM2G177229_T02 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

GRMZM2G177229_T03 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

GRMZM2G177229_T04 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

GRMZM2G177229_T05 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...

GRMZM2G177229_T06 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...

GRMZM2G177229_T07 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...

GRMZM2G177229_T08 from maize genome v3

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...

Zm00001d020954_T001 from maize genome v4

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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ATGGCTGAGCATCTTGCGTCCATCT...

Zm00001eb316870_T001 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

Zm00001eb316870_T002 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

Zm00001eb316870_T003 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

Zm00001eb316870_T004 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

Zm00001eb316870_T005 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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GAAGCATCCAGGCATCCAGCAAATC...

Zm00001eb316870_T006 from maize genome v5

Amino Acid Sequence
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MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITPGVDAQGNPIDPERIQEDFED
FYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEEQAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEH
SCNRGGYCNFMHVKQVGRDLRRKLFGHLHRSLRSHSRGSRSPSPYRRRGSSSRSRDRDDYHDYYYHYYRSGSGSRRSSER
HRSHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAAQV

Nucleotide Sequence
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AAGCATCCAGGCATCCAGCAAATCC...


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